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Graph representation learning in bioinformatics: trends, methods and applications 期刊论文  OAI收割
BRIEFINGS IN BIOINFORMATICS, 2022, 卷号: 23, 期号: 1, 页码: 1-6
作者:  Yi, HC (Yi, Hai-Cheng) [1] , [2];  You, ZH (You, Zhu-Hong) [3];  Huang, DS (Huang, De-Shuang) [4];  Kwoh, CK (Kwoh, Chee Keong) [5] , [6]
  |  收藏  |  浏览/下载：59/0  |  提交时间：2022/05/06
MeSHHeading2vec: a new method for representing MeSH headings as vectors based on graph embedding algorithm 期刊论文  OAI收割
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 2, 页码: 2085-2095
作者:  Guo,ZH (Guo, Zhen-Hao) 1;  You,ZH (You,Zhu-Hong) 1, 2;  Huang,DS (Huang, De-Shuang) 3, 4;  Yi, HC (Yi, Hai-Cheng) 2;  Zheng, K (Zheng, Kai) 5
  |  收藏  |  浏览/下载：26/0  |  提交时间：2021/08/09
Combining High Speed ELM Learning with a Deep Convolutional Neural Network Feature Encoding for Predicting Protein-RNA Interactions 期刊论文  OAI收割
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 卷号: 17, 期号: 3, 页码: 972-980
作者:  Wang, L (Wang, Lei)[ 1 ];  You, ZH (You, Zhu-Hong)[ 2 ];  Huang, DS (Huang, De-Shuang)[ 3 ];  Zhou, FF (Zhou, Fengfeng)[ 4,5 ]
  |  收藏  |  浏览/下载：20/0  |  提交时间：2020/12/09
A learning based framework for diverse biomolecule relationship prediction in molecular association network 期刊论文  OAI收割
COMMUNICATIONS BIOLOGY, 2020, 卷号: 3, 期号: 1, 页码: 1-9
作者:  Guo, ZH (Guo, Zhen-Hao)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 1,2 ];  Huang, DS (Huang, De-Shuang)[ 3 ];  Yi, HC (Yi, Hai-Cheng)[ 1,2 ];  Chen, ZH (Chen, Zhan-Heng)[ 1,2 ]
  |  收藏  |  浏览/下载：17/0  |  提交时间：2020/04/21
Learning Representations to Predict Intermolecular Interactions on Large-Scale Heterogeneous Molecular Association Network 期刊论文  OAI收割
ISCIENCE, 2020, 卷号: 23, 期号: 7, 页码: 1-16
作者:  Yi, HC (Yi, Hai-Cheng)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 1,2 ];  Huang, DS (Huang, De-Shuang)[ 3 ];  Guo, ZH (Guo, Zhen-Hao)[ 1 ];  Chan, KCC (Chan, Keith C. C.)[ 4 ]
  |  收藏  |  浏览/下载：25/0  |  提交时间：2020/09/09
An efficient approach based on multi-sources information to predict circRNA-disease associations using deep convolutional neural network 期刊论文  OAI收割
BIOINFORMATICS, 2020, 卷号: 36, 期号: 13, 页码: 4038-4046
作者:  Wang, L (Wang, Lei)[ 1 ];  You, ZH (You, Zhu-Hong)[ 1 ];  Huang, YA (Huang, Yu-An)[ 2 ];  Huang, DS (Huang, De-Shuang)[ 3 ];  Chan, KCC (Chan, Keith C. C.)[ 2 ]
  |  收藏  |  浏览/下载：16/0  |  提交时间：2020/09/09
Bioentity2vec: Attribute- and behavior-driven representation for predicting multi-type relationships between bioentities 期刊论文  OAI收割
GIGASCIENCE, 2020, 卷号: 9, 期号: 6, 页码: 1-12
作者:  Guo, ZH (Guo, Zhen-Hao)[ 1,2 ];  You, ZH (You, Zhu-Hong)[ 1,2 ];  Wang, YB (Wang, Yan-Bin)[ 3 ];  Huang, DS (Huang, De-Shuang)[ 4 ];  Yi, HC (Yi, Hai-Cheng)[ 1,2 ]
  |  收藏  |  浏览/下载：15/0  |  提交时间：2020/11/04
Improving Prediction of Self-interacting Proteins Using Stacked Sparse Auto-Encoder with PSSM profiles 期刊论文  OAI收割
INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES, 2018, 卷号: 14, 期号: 8, 页码: 983-991
作者:  Wang, YB (Wang, Yan-Bin);  You, ZH (You, Zhu-Hong);  Li, LP (Li, Li-Ping);  Huang, DS (Huang, De-Shuang);  Zhou, FF (Zhou, Feng-Feng)
  |  收藏  |  浏览/下载：33/0  |  提交时间：2018/07/16
A Deep Learning Framework for Robust and Accurate Prediction of ncRNA-Protein Interactions Using Evolutionary Information 期刊论文  OAI收割
MOLECULAR THERAPY-NUCLEIC ACIDS, 2018, 卷号: 11, 期号: 6, 页码: 337-344
作者:  Yi, HC (Yi, Hai-Cheng)[ 1,2,3 ];  You, ZH (You, Zhu-Hong)[ 1,2 ];  Huang, DS (Huang, De-Shuang)[ 4 ];  Li, X (Li, Xiao)[ 1,2 ];  Jiang, TH (Jiang, Tong-Hai)[ 1,2 ]
  |  收藏  |  浏览/下载：43/0  |  提交时间：2018/10/07
CIPPN: computational identification of protein pupylation sites by using neural network 期刊论文  OAI收割
ONCOTARGET, 2017, 卷号: 8, 期号: 65, 页码: 108867-108879
作者:  Bao, WZ (Bao, Wenzheng);  You, ZH (You, Zhu-Hong);  Huang, DS (Huang, De-Shuang)
  |  收藏  |  浏览/下载：35/0  |  提交时间：2018/05/18