The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis
文献类型：期刊论文
| 作者 | Xu, Jinshi2,3; Dang, Han1; Li, Huaizhu2 |
| 刊名 | MITOCHONDRIAL DNA PART B-RESOURCES
 |
| 出版日期 | 2020-04-02 |
| 卷号 | 5期号:2页码:1134-1135 |
| 关键词 | Cirsium shansiense chloroplast genome phylogenetic analysis |
| DOI | 10.1080/23802359.2020.1721032 |
| 通讯作者 | Li, Huaizhu(lihuaizhu121@126.com) |
| 英文摘要 | Cirsium shansiense is a common species in China, which can be used for traditional Chinese medicine. The chloroplast (cp) genome of C. shansiense exhibited a typical quadripartite cycle with 152,396 bp, including a pair of inverted repeat regions (IRa and IRb, 25,072 bp each), a large single-copy region (LSC, 83,517 bp), and a small single-copy region (SSC, 18,735 bp). One-hundred-thirty-three unique genes were assembled in the cp genome, including 88 protein genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 17 cp genomes of related species of Asteraceae showed that C. shansiense was closely related to Cirsium vulgare. This study provides important information for identification and conservation of species of Cirsium spp. |
| 资助项目 | Public Health Specialty in the Department of Traditional Chinese Medicine[2016-44] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2017-66] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2018-43] ; Public Health Specialty in the Department of Traditional Chinese Medicine[2019-68] ; Natural Science Basic Research Plan in Shaanxi Province of China[2018JM3021] ; State Key Laboratory of Cotton Biology[CB2018A07] ; China Postdoctoral Science Foundation[2018M643715] |
| WOS研究方向 | Genetics & Heredity |
| 语种 | 英语 |
| WOS记录号 | WOS:000517484000001 |
| 出版者 | TAYLOR & FRANCIS LTD |
| 资助机构 | Public Health Specialty in the Department of Traditional Chinese Medicine ; Natural Science Basic Research Plan in Shaanxi Province of China ; State Key Laboratory of Cotton Biology ; China Postdoctoral Science Foundation |
| 源URL | [http://ir.ieecas.cn/handle/361006/12684]  |
| 专题 | 地球环境研究所_生态环境研究室 |
| 通讯作者 | Li, Huaizhu |
| 作者单位 | 1.Chinese Acad Sci, Inst Earth Environm, Xian, Shaanxi, Peoples R China 2.Xianyang Normal Univ, Sch Chem & Chem Engn, Xianyang 712000, Shaanxi, Peoples R China 3.Northwest Univ, Sch Life Sci, Xian, Shaanxi, Peoples R China |
| 推荐引用方式 GB/T 7714 | Xu, Jinshi,Dang, Han,Li, Huaizhu. The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(2):1134-1135. |
| APA | Xu, Jinshi,Dang, Han,&Li, Huaizhu.(2020).The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis.MITOCHONDRIAL DNA PART B-RESOURCES,5(2),1134-1135. |
| MLA | Xu, Jinshi,et al."The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis".MITOCHONDRIAL DNA PART B-RESOURCES 5.2(2020):1134-1135. |
入库方式： OAI收割
来源：地球环境研究所
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