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Chinese Academy of Sciences Institutional Repositories Grid
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CAS IR Grid
机构
数学与系统科学研究... [10]
采集方式
OAI收割 [10]
内容类型
期刊论文 [10]
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2021 [2]
2020 [2]
2019 [3]
2018 [1]
2017 [1]
2016 [1]
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MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting
期刊论文
OAI收割
BRIEFINGS IN BIOINFORMATICS, 2021, 卷号: 22, 期号: 6, 页码: 14
作者:
Zou, Meng
;
Duren, Zhana
;
Yuan, Qiuyue
;
Li, Henry
;
Hutchins, Andrew Paul
  |  
收藏
  |  
浏览/下载:22/0
  |  
提交时间:2022/04/02
cell type-specific marker
TFs
surface markers
dimension reduction
hierarchical topology
hReg-CNCC reconstructs a regulatory network in human cranial neural crest cells and annotates variants in a developmental context
期刊论文
OAI收割
COMMUNICATIONS BIOLOGY, 2021, 卷号: 4, 期号: 1, 页码: 16
作者:
Feng, Zhanying
;
Duren, Zhana
;
Xiong, Ziyi
;
Wang, Sijia
;
Liu, Fan
  |  
收藏
  |  
浏览/下载:33/0
  |  
提交时间:2021/06/01
Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation
期刊论文
OAI收割
NATURE COMMUNICATIONS, 2020, 卷号: 11, 期号: 1, 页码: 20
作者:
Xin, Jingxue
;
Zhang, Hui
;
He, Yaoxi
;
Duren, Zhana
;
Bai, Caijuan
  |  
收藏
  |  
浏览/下载:38/0
  |  
提交时间:2021/01/14
Time course regulatory analysis based on paired expression and chromatin accessibility data
期刊论文
OAI收割
GENOME RESEARCH, 2020, 卷号: 30, 期号: 4, 页码: 622-634
作者:
Duren, Zhana
;
Chen, Xi
;
Xin, Jingxue
;
Wang, Yong
;
Wong, Wing Hung
  |  
收藏
  |  
浏览/下载:20/0
  |  
提交时间:2020/06/30
DC3 is a method for deconvolution and coupled clustering from bulk and single-cell genomics data
期刊论文
OAI收割
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 11
作者:
Zeng, Wanwen
;
Chen, Xi
;
Duren, Zhana
;
Wang, Yong
;
Jiang, Rui
  |  
收藏
  |  
浏览/下载:77/0
  |  
提交时间:2020/01/10
Hierarchical graphical model reveals HFR1 bridging circadian rhythm and flower development in Arabidopsis thaliana
期刊论文
OAI收割
NPJ SYSTEMS BIOLOGY AND APPLICATIONS, 2019, 卷号: 5, 页码: 11
作者:
Duren, Zhana
;
Wang, Yaling
;
Wang, Jiguang
;
Zhao, Xing-Ming
;
Lv, Le
  |  
收藏
  |  
浏览/下载:31/0
  |  
提交时间:2020/05/24
TFAP2C-and p63-Dependent Networks Sequentially Rearrange Chromatin Landscapes to Drive Human Epidermal Lineage Commitment
期刊论文
OAI收割
CELL STEM CELL, 2019, 卷号: 24, 期号: 2, 页码: 271-+
作者:
Li, Lingjie
;
Wang, Yong
;
Torkelson, Jessica L.
;
Shankar, Gautam
;
Pattison, Jillian M.
  |  
收藏
  |  
浏览/下载:74/0
  |  
提交时间:2019/03/11
Integrative analysis of single-cell genomics data by coupled nonnegative matrix factorizations
期刊论文
OAI收割
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2018, 卷号: 115, 期号: 30, 页码: 7723-7728
作者:
Duren, Zhana
;
Chen, Xi
;
Zamanighomi, Mahdi
;
Zeng, Wanwen
;
Satpathy, Ansuman T.
  |  
收藏
  |  
浏览/下载:27/0
  |  
提交时间:2019/12/13
coupled clustering
NMF
single-cell genomic data
Modeling gene regulation from paired expression and chromatin accessibility data
期刊论文
OAI收割
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 卷号: 114, 期号: 25, 页码: E4914-E4923
作者:
Duren, Zhana
;
Chen, Xi
;
Jiang, Rui
;
Wang, Yong
;
Wong, Wing Hung
  |  
收藏
  |  
浏览/下载:21/0
  |  
提交时间:2018/07/30
gene regulation
transcription factor
regulatory element
chromatin regulator
chromatin activity
A systematic method to identify modulation of transcriptional regulation via chromatin activity reveals regulatory network during mESC differentiation
期刊论文
OAI收割
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 12
作者:
Duren, Zhana
;
Wang, Yong
  |  
收藏
  |  
浏览/下载:28/0
  |  
提交时间:2018/07/30