中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
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CAS IR Grid
机构
上海药物研究所 [62]
化学研究所 [17]
大连化学物理研究所 [16]
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期刊论文 [289]
会议论文 [3]
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Interaction-Based Inductive Bias in Graph Neural Networks: Enhancing Protein-Ligand Binding Affinity Predictions From 3D Structures
期刊论文
OAI收割
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2024, 卷号: 46, 期号: 12, 页码: 8191-8208
作者:
Yang, Ziduo
;
Zhong, Weihe
;
Lv, Qiujie
;
Dong, Tiejun
;
Chen, Guanxing
  |  
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2025/01/14
Proteins
Programmable logic arrays
Three-dimensional displays
Predictive models
Graph neural networks
Data models
Convolution
Protein-ligand binding affinity
graph neural networks
inductive bias
drug-target interaction
structure-based virtual screening
FuncPhos-STR: An integrated deep neural network for functional phosphosite prediction based on AlphaFold protein structure and dynamics
期刊论文
OAI收割
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 卷号: 266, 页码: 11
作者:
Zhang, Guangyu
;
Zhang, Cai
;
Cai, Mingyue
;
Luo, Cheng
;
Zhu, Fei
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收藏
  |  
浏览/下载:24/0
  |  
提交时间:2024/06/27
Functional phosphosite
Deep learning
AlphaFold protein structure
Dynamics
Protein protein interaction
A Computational and Chemical Design Strategy for Manipulating Glycan-Protein Recognition
期刊论文
OAI收割
ADVANCED SCIENCE, 2024, 页码: 14
作者:
Zhu, Qiang
;
Geng, Didi
;
Li, Jingchao
;
Zhang, Jinqiu
;
Sun, Haofan
  |  
收藏
  |  
浏览/下载:20/0
  |  
提交时间:2024/05/22
CH-pi interaction
glycan-protein recognition
glycoproteomics
PhoSL
core fucose
A new paradigm for applying deep learning to protein-ligand interaction prediction
期刊论文
OAI收割
BRIEFINGS IN BIOINFORMATICS, 2024, 卷号: 25, 期号: 3, 页码: 12
作者:
Wang, Zechen
;
Wang, Sheng
;
Li, Yangyang
;
Guo, Jingjing
;
Wei, Yanjie
  |  
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2024/12/06
protein-ligand interaction
scoring function
deep learning
graph neural network
Structural framework for the understanding spectroscopic and functional signatures of the cyanobacterial Orange Carotenoid Protein families
期刊论文
OAI收割
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 卷号: 254, 页码: 20
作者:
Sluchanko, Nikolai N.
;
Maksimov, Eugene G.
;
Slonimskiy, Yury B.
;
Varfolomeeva, Larisa A.
;
Bukhanko, Antonina Y.
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收藏
  |  
浏览/下载:16/0
  |  
提交时间:2024/01/26
Photoprotection
Phycobilisome fluorescence quenching
Crystal structure
Protein-protein interaction
Absorption spectroscopy
Photoactivity
SEC-MALS
Structural framework for the understanding spectroscopic and functional signatures of the cyanobacterial Orange Carotenoid Protein families
期刊论文
OAI收割
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 卷号: 254, 页码: 20
作者:
Sluchanko, Nikolai N.
;
Maksimov, Eugene G.
;
Slonimskiy, Yury B.
;
Varfolomeeva, Larisa A.
;
Bukhanko, Antonina Y.
  |  
收藏
  |  
浏览/下载:1/0
  |  
提交时间:2024/11/02
Photoprotection
Phycobilisome fluorescence quenching
Crystal structure
Protein-protein interaction
Absorption spectroscopy
Photoactivity
SEC-MALS
Structural framework for the understanding spectroscopic and functional signatures of the cyanobacterial Orange Carotenoid Protein families
期刊论文
OAI收割
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 卷号: 254, 页码: 20
作者:
Sluchanko, Nikolai N.
;
Maksimov, Eugene G.
;
Slonimskiy, Yury B.
;
Varfolomeeva, Larisa A.
;
Bukhanko, Antonina Y.
  |  
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2024/11/02
Photoprotection
Phycobilisome fluorescence quenching
Crystal structure
Protein-protein interaction
Absorption spectroscopy
Photoactivity
SEC-MALS
Discovery, Structure-Activity Relationship and In Vitro Anticancer Activity of Small-Molecule Inhibitors of the Protein-Protein Interactions between AF9/ENL and AF4 or DOT1L
期刊论文
OAI收割
CANCERS, 2023, 卷号: 15, 期号: 21, 页码: 28
作者:
Li, Xin
;
Wu, Xiaowei
;
Nie, Shenyou
;
Zhao, Jidong
;
Yao, Yuan
  |  
收藏
  |  
浏览/下载:24/0
  |  
提交时间:2023/12/19
MLL-rearranged leukemia
super elongation complexes
small-molecule inhibitor
protein-protein interaction
cancer therapeutics
Discovery of a highly potent NPAS3 heterodimer inhibitor by covalently modifying ARNT
期刊论文
OAI收割
BIOORGANIC CHEMISTRY, 2023, 卷号: 139, 页码: 10
作者:
Li, Peizhuo
;
Tian, Yucheng
;
Shang, Qinghong
;
Tang, Cailing
;
Hou, Zeng
  |  
收藏
  |  
浏览/下载:32/0
  |  
提交时间:2023/10/17
NPAS3
Covalent inhibitor
Protein -protein interaction
5-nitrothiazole warhead
Pharmacological characterization of the small molecule 03A10 as an inhibitor of α-synuclein aggregation for Parkinson's disease treatment
期刊论文
OAI收割
ACTA PHARMACOLOGICA SINICA, 2023, 卷号: 44, 期号: 6, 页码: 1122-1134
作者:
Wang, Qing
;
Yao, Sheng
;
Yang, Ze-xian
;
Zhou, Chen
;
Zhang, Yu
  |  
收藏
  |  
浏览/下载:24/0
  |  
提交时间:2024/03/27
Parkinson's disease
alpha-synuclein aggregation
protein-protein interaction
03A10
MPTP/p model
enema inoculation model