中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
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机构
上海药物研究所 [3]
大连化学物理研究所 [3]
长春应用化学研究所 [3]
力学研究所 [2]
生态环境研究中心 [2]
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OAI收割 [17]
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期刊论文 [18]
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2024 [1]
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2018 [2]
2015 [2]
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学科主题
Biochemist... [1]
物理化学 [1]
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浏览/检索结果:
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Interaction-Based Inductive Bias in Graph Neural Networks: Enhancing Protein-Ligand Binding Affinity Predictions From 3D Structures
期刊论文
OAI收割
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2024, 卷号: 46, 期号: 12, 页码: 8191-8208
作者:
Yang, Ziduo
;
Zhong, Weihe
;
Lv, Qiujie
;
Dong, Tiejun
;
Chen, Guanxing
  |  
收藏
  |  
浏览/下载:9/0
  |  
提交时间:2025/01/14
Proteins
Programmable logic arrays
Three-dimensional displays
Predictive models
Graph neural networks
Data models
Convolution
Protein-ligand binding affinity
graph neural networks
inductive bias
drug-target interaction
structure-based virtual screening
Two dimensional measurements of receptor ligand interactions
期刊论文
OAI收割
FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 卷号: 10, 页码: 1154074
作者:
Zheng SJ(郑松杰)
;
Zou M(邹敏)
;
Shao YF(邵颖峰)
;
Wu, Huaping
;
Wu, Helong
  |  
收藏
  |  
浏览/下载:10/0
  |  
提交时间:2023/04/20
receptor ligand interaction
binding kinetics
kinetic on rate
kinetic off rate
binding affinity
two dimensional measuring methods
Evaluation of the binding performance of flavonoids to estrogen receptor alpha by Autodock, Autodock Vina and Surflex-Dock
期刊论文
OAI收割
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY, 2022, 卷号: 233, 期号: 0, 页码: 113323
作者:
Xue, Qiao
;
Liu, Xian
;
Russell, Paul
;
Li, Jin
;
Pan, Wenxiao
  |  
收藏
  |  
浏览/下载:21/0
  |  
提交时间:2022/11/08
PROTEIN-LIGAND DOCKING
MOLECULAR DOCKING
DISCOVERY
FRAMEWORK
DYNAMICS
AFFINITY
CSConv2d: A 2-D Structural Convolution Neural Network with a Channel and Spatial Attention Mechanism for Protein-Ligand Binding Affinity Prediction
期刊论文
OAI收割
BIOMOLECULES, 2021, 卷号: 11, 期号: 5, 页码: 9
作者:
Wang, Xun
;
Liu, Dayan
;
Zhu, Jinfu
;
Rodriguez-Paton, Alfonso
;
Song, Tao
  |  
收藏
  |  
浏览/下载:62/0
  |  
提交时间:2021/12/01
protein-ligand binding affinity
2-D structural CNN
spatial attention mechanism
Direct fluorescence anisotropy approach for aflatoxin B1 detection and affinity binding study by using single tetramethylrhodamine labeled aptamer
期刊论文
OAI收割
TALANTA, 2018, 卷号: 189, 页码: 442-450
作者:
Sun, Linlin
;
Zhao, Qiang
  |  
收藏
  |  
浏览/下载:223/0
  |  
提交时间:2019/06/20
Aptamer
Fluorescence anisotropy
Fluorescence polarization
Aflatoxin
Affinity ligand
Binding affinity
Recent Trends and Applications of Molecular Modeling in GPCR-Ligand Recognition and Structure-Based Drug Design
期刊论文
OAI收割
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2018, 卷号: 19, 期号: 7
作者:
Yuan, Xiaojing
;
Xu, Yechun
  |  
收藏
  |  
浏览/下载:26/0
  |  
提交时间:2019/01/08
GPCR
receptor-ligand recognition
drug design
molecular modeling
molecular dynamics
docking
binding affinity
binding pathway
Affinity purification in target identification: the specificity challenge
期刊论文
OAI收割
archives of pharmacal research, 2015, 卷号: 38, 期号: 9, 页码: 1661-1685
作者:
Zheng, Wenlu
;
Li, Gang
;
Li, Xiaoyu
收藏
  |  
浏览/下载:140/0
  |  
提交时间:2015/11/17
Target identification
Affinity purification
Small molecule
Phenotypic screening
Protein-ligand interaction
Specificity
Multiple ligand detection and affinity measurement by ultrafiltration and mass spectrometry analysis applied to fragment mixture screening
期刊论文
OAI收割
ANALYTICA CHIMICA ACTA, 2015, 卷号: 886, 页码: 98-106
作者:
Qin, Shanshan
;
Ren, Yiran
;
Fu, Xu
;
Shen, Jie
;
Chen, Xin
收藏
  |  
浏览/下载:49/0
  |  
提交时间:2016/06/23
Ultrafiltration-LC/MS
Multiple ligand detection
Affinity measurement
Fragment library screening
NS5B
Rational Drug Design: The Search for Ras Protein Hydrolysis Intermediate Conformation Inhibitors with Both Affinity and Specificity
期刊论文
OAI收割
current pharmaceutical design, 2013, 卷号: 19, 期号: 12, 页码: 2246-2258
Zheng XL
;
Liu ZJ
;
Li D
;
Wang EK
;
Wang J
收藏
  |  
浏览/下载:28/0
  |  
提交时间:2014/04/20
EMPIRICAL SCORING FUNCTIONS
SMALL-MOLECULE INHIBITOR
SELF-ORGANIZING MAP
MARKETED ORAL-DRUGS
LIGAND INTERACTIONS
FLEXIBLE DOCKING
AUTOMATED DOCKING
BINDING-AFFINITY
GENETIC ALGORITHM
COMPOUND COLLECTIONS
Optimizing Scoring Function of Protein-Nucleic Acid Interactions with Both Affinity and Specificity
期刊论文
OAI收割
plos one, 2013, 卷号: 8, 期号: 9, 页码: 文献号: e74443
Yan ZQ
;
Wang J
收藏
  |  
浏览/下载:22/0
  |  
提交时间:2014/04/15
KNOWLEDGE-BASED POTENTIALS
COMPUTATIONAL REDESIGN
DOCKING BENCHMARK
MEAN FORCE
MOLECULAR RECOGNITION
BINDING-AFFINITY
DNA INTERACTIONS
ENERGY FUNCTION
LIGAND-BINDING
DATA-BANK